PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_013591757.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
Family Trihelix
Protein Properties Length: 300aa    MW: 33076 Da    PI: 8.0638
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_013591757.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix48.72e-1573155186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm...rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     +W+++ +++Li+a  ++ ++ ++g lk+++W ev++ +    + ++ ++ +qCk++++ ++k+yk++k+ ++       s++++f++le
  XP_013591757.1  73 CWSEEATKVLINAWGDRFSEPGKGTLKQQQWHEVAEIVnesGQCKYAKTDVQCKNRIDTVKKKYKQEKAKNGP------SKWAFFKKLE 155
                     7*************************************5444455899***********************97......58******98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.5E-2372157No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    Send to blast
MEEEDKTQSQ QSPRDALSPA PILPTSNVTV ASATKPPPSS SSQSPLALVV QTPSVNRNGR  60
IGGGGGGGGR DDCWSEEATK VLINAWGDRF SEPGKGTLKQ QQWHEVAEIV NESGQCKYAK  120
TDVQCKNRID TVKKKYKQEK AKNGPSKWAF FKKLESLIGG GGNAPVGARS SGPMRWHFRK  180
RSASETESES ESEPEHSAEN LPPTQPLPKR LKMGESGVGD VAKAILGFTE AYEKAETAKL  240
KLMMELEKER MKFAKEMELQ RMHFLITQVE ITRTNQEEER SKRDGDDDDR NVKNNGDVSS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankDQ9738450.0DQ973845.1 Brassica napus clone PBCESTNA20 microsatellite sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013591757.10.0PREDICTED: trihelix transcription factor ASIL1
RefseqXP_013643641.10.0PREDICTED: trihelix transcription factor ASIL1-like
SwissprotQ9SYG21e-114ASIL1_ARATH; Trihelix transcription factor ASIL1
TrEMBLA0A078H8B00.0A0A078H8B0_BRANA; BnaC06g06860D protein
TrEMBLA0A0D3CQV40.0A0A0D3CQV4_BRAOL; Uncharacterized protein
STRINGBra037960.1-P1e-139(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM89101637
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54060.13e-986B-interacting protein 1-like 1